DatasetT11b high vs low squamous_GSEA_Ranked
PhenotypeNoPhenotypeAvailable
Upregulated in classna_pos
GeneSetHALLMARK_TGF_BETA_SIGNALING
Enrichment Score (ES)0.32471457
Normalized Enrichment Score (NES)1.2878417
Nominal p-value0.16136919
FDR q-value0.25372356
FWER p-Value0.932
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_TGF_BETA_SIGNALING   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Serpine1892.2950.1328Yes
2Rab311561.7750.2362Yes
3Ppp1r15a5520.8430.1960Yes
4Wwtr17050.6630.2034Yes
5Hipk27250.6510.2426Yes
6Ski7270.6460.2858Yes
7Eng8670.5600.2894Yes
8Smurf19050.5290.3160Yes
9Smad61086-0.5190.3068Yes
10Fnta1273-0.5510.2982Yes
11Smad31449-0.5840.2946Yes
12Hdac11490-0.5920.3247Yes
13Tgif11899-0.6730.2699No
14Smurf22298-0.7610.2235No
15Cdkn1c2722-0.8820.1791No
16Cdh12989-0.9750.1794No
17Bmpr1a3653-1.3410.1070No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_TGF_BETA_SIGNALING: Random ES distribution   
Gene set null distribution of ES for HALLMARK_TGF_BETA_SIGNALING